Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 AC124732.2-201ENSMUST00000221977 316 ntBASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rpap1Q80TE0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Gm5184-201ENSMUST00000220417 1702 ntBASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rpap1Q80TE0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Gm14722-201ENSMUST00000118943 689 ntBASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rpap1Q80TE0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Gm23547-201ENSMUST00000158210 271 ntBASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Rpap1Q80TE0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Gm7292-201ENSMUST00000194706 2527 ntBASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC24.39■■□□□ 1.5
Rpap1Q80TE0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Gm8318-201ENSMUST00000182954 872 ntBASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Gm10253-201ENSMUST00000194270 940 ntBASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Rpap1Q80TE0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC24.39■■□□□ 1.49
Rpap1Q80TE0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rpap1Q80TE0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rpap1Q80TE0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Rpap1Q80TE0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rpap1Q80TE0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Gm6018-201ENSMUST00000216090 1306 ntBASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC24.38■■□□□ 1.49
Rpap1Q80TE0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms