Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Gm27628-201ENSMUST00000184911 107 ntBASIC17.32■□□□□ 0.36
Ush1gQ80T11 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.32■□□□□ 0.36
Ush1gQ80T11 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.32■□□□□ 0.36
Ush1gQ80T11 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1gQ80T11 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ush1gQ80T11 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ush1gQ80T11 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.3■□□□□ 0.36
Ush1gQ80T11 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ush1gQ80T11 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.29■□□□□ 0.36
Ush1gQ80T11 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.29■□□□□ 0.36
Ush1gQ80T11 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ush1gQ80T11 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ush1gQ80T11 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.28■□□□□ 0.36
Ush1gQ80T11 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms