Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm25990-201ENSMUST00000102440 86 ntBASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm1401-201ENSMUST00000122048 772 ntBASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh8Q7TSK3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh8Q7TSK3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh8Q7TSK3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdh8Q7TSK3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms