Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Vma21Q78T54 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.95□□□□□ -0.34
Vma21Q78T54 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.95□□□□□ -0.34
Vma21Q78T54 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vma21Q78T54 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.95□□□□□ -0.34
Vma21Q78T54 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.94□□□□□ -0.34
Vma21Q78T54 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.94□□□□□ -0.34
Vma21Q78T54 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.94□□□□□ -0.34
Vma21Q78T54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vma21Q78T54 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vma21Q78T54 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vma21Q78T54 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.93□□□□□ -0.34
Vma21Q78T54 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vma21Q78T54 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vma21Q78T54 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vma21Q78T54 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.92□□□□□ -0.34
Vma21Q78T54 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.92□□□□□ -0.34
Vma21Q78T54 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Gm27011-201ENSMUST00000182352 972 ntBASIC12.92□□□□□ -0.34
Vma21Q78T54 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Gm18959-201ENSMUST00000208954 655 ntBASIC12.92□□□□□ -0.34
Vma21Q78T54 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vma21Q78T54 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vma21Q78T54 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms