Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cspg5Q71M36 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Gm25990-201ENSMUST00000102440 86 ntBASIC16.42■□□□□ 0.22
Cspg5Q71M36 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cspg5Q71M36 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Gm4535-201ENSMUST00000182274 558 ntBASIC16.41■□□□□ 0.22
Cspg5Q71M36 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Gm10355-201ENSMUST00000097146 517 ntBASIC16.41■□□□□ 0.22
Cspg5Q71M36 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cspg5Q71M36 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Gm4995-201ENSMUST00000117247 432 ntBASIC16.4■□□□□ 0.22
Cspg5Q71M36 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.4■□□□□ 0.22
Cspg5Q71M36 Psmb5-202ENSMUST00000227257 622 ntBASIC16.4■□□□□ 0.22
Cspg5Q71M36 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cspg5Q71M36 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.39■□□□□ 0.22
Cspg5Q71M36 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms