Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ddx58Q6Q899 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Gm37935-201ENSMUST00000192012 982 ntBASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx58Q6Q899 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Gm45167-201ENSMUST00000208007 322 ntBASIC19.55■□□□□ 0.72
Ddx58Q6Q899 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx58Q6Q899 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.54■□□□□ 0.72
Ddx58Q6Q899 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx58Q6Q899 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddx58Q6Q899 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms