Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup98Q6PFD9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup98Q6PFD9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nup98Q6PFD9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nup98Q6PFD9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nup98Q6PFD9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup98Q6PFD9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Mir1895-201ENSMUST00000122615 79 ntBASIC18.5■□□□□ 0.55
Nup98Q6PFD9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup98Q6PFD9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms