Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Gm5177-201ENSMUST00000183092 997 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Grk6-207ENSMUST00000225925 2769 ntBASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Snrnp40Q6PE01 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gm20949-201ENSMUST00000206478 952 ntBASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Snrnp40Q6PE01 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Snrnp40Q6PE01 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Snrnp40Q6PE01 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.9□□□□□ -0.19
Snrnp40Q6PE01 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Snrnp40Q6PE01 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms