Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf220Q6PDX6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf220Q6PDX6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf220Q6PDX6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Phf7-203ENSMUST00000226565 1971 ntBASIC15.08■□□□□ 0
Rnf220Q6PDX6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.08■□□□□ 0
Rnf220Q6PDX6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf220Q6PDX6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.07■□□□□ 0
Rnf220Q6PDX6 Gm10517-202ENSMUST00000192970 758 ntBASIC15.07■□□□□ 0
Rnf220Q6PDX6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Rnf220Q6PDX6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.06■□□□□ 0
Rnf220Q6PDX6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Gm15039-201ENSMUST00000118914 875 ntBASIC15.06■□□□□ 0
Rnf220Q6PDX6 Gm24841-201ENSMUST00000158676 357 ntBASIC15.06■□□□□ 0
Rnf220Q6PDX6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf220Q6PDX6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms