Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.03■□□□□ 0.32
ShbQ6PD21 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm14719-201ENSMUST00000121891 340 ntBASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm16215-201ENSMUST00000161990 637 ntBASIC17.03■□□□□ 0.32
ShbQ6PD21 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.03■□□□□ 0.32
ShbQ6PD21 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.03■□□□□ 0.32
ShbQ6PD21 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.03■□□□□ 0.32
ShbQ6PD21 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.03■□□□□ 0.32
ShbQ6PD21 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ShbQ6PD21 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ShbQ6PD21 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.03■□□□□ 0.32
ShbQ6PD21 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Syt7-205ENSMUST00000224135 1557 ntBASIC17.02■□□□□ 0.32
ShbQ6PD21 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ShbQ6PD21 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Gm9824-201ENSMUST00000178707 561 ntBASIC17.02■□□□□ 0.32
ShbQ6PD21 Gm43433-201ENSMUST00000196573 481 ntBASIC17.02■□□□□ 0.32
ShbQ6PD21 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Gm44855-201ENSMUST00000205725 362 ntBASIC17.02■□□□□ 0.32
ShbQ6PD21 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.02■□□□□ 0.32
ShbQ6PD21 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ShbQ6PD21 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ShbQ6PD21 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.02■□□□□ 0.31
ShbQ6PD21 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.02■□□□□ 0.31
ShbQ6PD21 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ShbQ6PD21 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Gm15487-201ENSMUST00000122373 465 ntBASIC17.01■□□□□ 0.31
ShbQ6PD21 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Gm29541-201ENSMUST00000191351 678 ntBASIC17.01■□□□□ 0.31
ShbQ6PD21 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Gm9063-201ENSMUST00000223299 582 ntBASIC17.01■□□□□ 0.31
ShbQ6PD21 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.01■□□□□ 0.31
ShbQ6PD21 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ShbQ6PD21 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Gm42939-201ENSMUST00000197514 2205 ntBASIC17■□□□□ 0.31
ShbQ6PD21 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17■□□□□ 0.31
ShbQ6PD21 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
ShbQ6PD21 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17■□□□□ 0.31
ShbQ6PD21 Gm8318-201ENSMUST00000182954 872 ntBASIC17■□□□□ 0.31
ShbQ6PD21 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ShbQ6PD21 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms