Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herc4Q6PAV2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc4Q6PAV2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Ank2-226ENSMUST00000189368 339 ntBASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herc4Q6PAV2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Herc4Q6PAV2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Herc4Q6PAV2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Herc4Q6PAV2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Herc4Q6PAV2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Herc4Q6PAV2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.5■□□□□ 0.39
Herc4Q6PAV2 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herc4Q6PAV2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herc4Q6PAV2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms