Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Mir6982-201ENSMUST00000184354 68 ntBASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd3Q6P9Z1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.58□□□□□ -0.07
Smarcd3Q6P9Z1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd3Q6P9Z1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd3Q6P9Z1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd3Q6P9Z1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcd3Q6P9Z1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd3Q6P9Z1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smarcd3Q6P9Z1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms