Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Gm11355-201ENSMUST00000121120 306 ntBASIC17.78■□□□□ 0.44
Abcf1Q6P542 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Abcf1Q6P542 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.77■□□□□ 0.44
Abcf1Q6P542 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Gm10566-201ENSMUST00000086739 996 ntBASIC17.77■□□□□ 0.44
Abcf1Q6P542 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcf1Q6P542 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Abcf1Q6P542 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.76■□□□□ 0.43
Abcf1Q6P542 Gm36967-201ENSMUST00000193814 266 ntBASIC17.76■□□□□ 0.43
Abcf1Q6P542 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Gm18115-201ENSMUST00000221209 621 ntBASIC17.76■□□□□ 0.43
Abcf1Q6P542 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.76■□□□□ 0.43
Abcf1Q6P542 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.76■□□□□ 0.43
Abcf1Q6P542 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Abcf1Q6P542 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.75■□□□□ 0.43
Abcf1Q6P542 Gm9013-201ENSMUST00000132939 882 ntBASIC17.75■□□□□ 0.43
Abcf1Q6P542 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Abcf1Q6P542 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Abcf1Q6P542 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Abcf1Q6P542 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms