Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdzrn3Q69ZS0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Gm25406-201ENSMUST00000157599 105 ntBASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdzrn3Q69ZS0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pdzrn3Q69ZS0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pdzrn3Q69ZS0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.39■□□□□ 0.7
Pdzrn3Q69ZS0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Gm36967-201ENSMUST00000193814 266 ntBASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdzrn3Q69ZS0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdzrn3Q69ZS0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pdzrn3Q69ZS0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Gm4995-201ENSMUST00000117247 432 ntBASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdzrn3Q69ZS0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms