Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col11a2Q64739 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col11a2Q64739 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col11a2Q64739 Gm28630-201ENSMUST00000187806 498 ntBASIC19.05■□□□□ 0.64
Col11a2Q64739 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.05■□□□□ 0.64
Col11a2Q64739 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.05■□□□□ 0.64
Col11a2Q64739 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col11a2Q64739 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.05■□□□□ 0.64
Col11a2Q64739 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col11a2Q64739 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col11a2Q64739 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Gm14719-201ENSMUST00000121891 340 ntBASIC19.04■□□□□ 0.64
Col11a2Q64739 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Gm2272-201ENSMUST00000194903 582 ntBASIC19.04■□□□□ 0.64
Col11a2Q64739 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.04■□□□□ 0.64
Col11a2Q64739 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.04■□□□□ 0.64
Col11a2Q64739 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.04■□□□□ 0.64
Col11a2Q64739 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.04■□□□□ 0.64
Col11a2Q64739 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col11a2Q64739 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Gm13453-201ENSMUST00000118708 357 ntBASIC19.03■□□□□ 0.64
Col11a2Q64739 Mir8102-201ENSMUST00000184148 139 ntBASIC19.03■□□□□ 0.64
Col11a2Q64739 Gm27680-201ENSMUST00000184192 160 ntBASIC19.03■□□□□ 0.64
Col11a2Q64739 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col11a2Q64739 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.03■□□□□ 0.64
Col11a2Q64739 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.03■□□□□ 0.64
Col11a2Q64739 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col11a2Q64739 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col11a2Q64739 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Col11a2Q64739 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Col11a2Q64739 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col11a2Q64739 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.02■□□□□ 0.63
Col11a2Q64739 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col11a2Q64739 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col11a2Q64739 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.02■□□□□ 0.63
Col11a2Q64739 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.02■□□□□ 0.63
Col11a2Q64739 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.01■□□□□ 0.63
Col11a2Q64739 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.01■□□□□ 0.63
Col11a2Q64739 Gm44855-201ENSMUST00000205725 362 ntBASIC19.01■□□□□ 0.63
Col11a2Q64739 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.01■□□□□ 0.63
Col11a2Q64739 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.01■□□□□ 0.63
Col11a2Q64739 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col11a2Q64739 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col11a2Q64739 Gm7488-201ENSMUST00000117148 684 ntBASIC19■□□□□ 0.63
Col11a2Q64739 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col11a2Q64739 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a2Q64739 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a2Q64739 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19■□□□□ 0.63
Col11a2Q64739 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col11a2Q64739 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms