Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.63□□□□□ -0.23
Vamp1Q62442 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.63□□□□□ -0.23
Vamp1Q62442 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.63□□□□□ -0.23
Vamp1Q62442 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vamp1Q62442 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.62□□□□□ -0.23
Vamp1Q62442 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.62□□□□□ -0.23
Vamp1Q62442 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vamp1Q62442 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vamp1Q62442 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.61□□□□□ -0.23
Vamp1Q62442 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Gm11249-201ENSMUST00000117071 859 ntBASIC13.61□□□□□ -0.23
Vamp1Q62442 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Gm37292-201ENSMUST00000192062 758 ntBASIC13.61□□□□□ -0.23
Vamp1Q62442 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.61□□□□□ -0.23
Vamp1Q62442 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Rubie-203ENSMUST00000227803 2430 ntBASIC13.61□□□□□ -0.23
Vamp1Q62442 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.61□□□□□ -0.23
Vamp1Q62442 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vamp1Q62442 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vamp1Q62442 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Vamp1Q62442 Gm12896-201ENSMUST00000118430 226 ntBASIC13.6□□□□□ -0.23
Vamp1Q62442 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Gm9731-201ENSMUST00000209480 747 ntBASIC13.6□□□□□ -0.23
Vamp1Q62442 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.6□□□□□ -0.23
Vamp1Q62442 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vamp1Q62442 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms