Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.89■□□□□ 0.29
Six2Q62232 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Six2Q62232 Gm27357-201ENSMUST00000183754 135 ntBASIC16.89■□□□□ 0.29
Six2Q62232 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.89■□□□□ 0.29
Six2Q62232 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Six2Q62232 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Six2Q62232 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.88■□□□□ 0.29
Six2Q62232 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Six2Q62232 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.88■□□□□ 0.29
Six2Q62232 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Six2Q62232 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Six2Q62232 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Six2Q62232 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.87■□□□□ 0.29
Six2Q62232 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.87■□□□□ 0.29
Six2Q62232 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Six2Q62232 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.87■□□□□ 0.29
Six2Q62232 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.87■□□□□ 0.29
Six2Q62232 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Six2Q62232 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Six2Q62232 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Six2Q62232 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.86■□□□□ 0.29
Six2Q62232 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.86■□□□□ 0.29
Six2Q62232 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.86■□□□□ 0.29
Six2Q62232 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.86■□□□□ 0.29
Six2Q62232 Gm27867-201ENSMUST00000184778 125 ntBASIC16.86■□□□□ 0.29
Six2Q62232 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.86■□□□□ 0.29
Six2Q62232 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Gm7367-201ENSMUST00000057611 492 ntBASIC16.86■□□□□ 0.29
Six2Q62232 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Six2Q62232 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six2Q62232 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six2Q62232 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms