Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.25■□□□□ 0.19
Six1Q62231 Gm5587-201ENSMUST00000206270 674 ntBASIC16.25■□□□□ 0.19
Six1Q62231 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.25■□□□□ 0.19
Six1Q62231 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.25■□□□□ 0.19
Six1Q62231 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Six1Q62231 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.25■□□□□ 0.19
Six1Q62231 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Six1Q62231 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Six1Q62231 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.25■□□□□ 0.19
Six1Q62231 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Six1Q62231 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Six1Q62231 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.24■□□□□ 0.19
Six1Q62231 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Six1Q62231 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.24■□□□□ 0.19
Six1Q62231 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Gm7367-201ENSMUST00000057611 492 ntBASIC16.24■□□□□ 0.19
Six1Q62231 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.24■□□□□ 0.19
Six1Q62231 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Six1Q62231 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Six1Q62231 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Six1Q62231 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.23■□□□□ 0.19
Six1Q62231 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.23■□□□□ 0.19
Six1Q62231 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Gm10231-201ENSMUST00000181584 441 ntBASIC16.23■□□□□ 0.19
Six1Q62231 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Gm10175-202ENSMUST00000208752 441 ntBASIC16.23■□□□□ 0.19
Six1Q62231 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.23■□□□□ 0.19
Six1Q62231 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Six1Q62231 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Six1Q62231 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six1Q62231 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Six1Q62231 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.22■□□□□ 0.19
Six1Q62231 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Six1Q62231 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Six1Q62231 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Gm15794-201ENSMUST00000120182 631 ntBASIC16.22■□□□□ 0.19
Six1Q62231 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Six1Q62231 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.22■□□□□ 0.19
Six1Q62231 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Six1Q62231 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms