Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn9aQ62205 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.53■□□□□ 0.56
Scn9aQ62205 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.53■□□□□ 0.56
Scn9aQ62205 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn9aQ62205 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Gm12151-201ENSMUST00000121374 290 ntBASIC18.52■□□□□ 0.56
Scn9aQ62205 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.52■□□□□ 0.56
Scn9aQ62205 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.52■□□□□ 0.56
Scn9aQ62205 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Scn9aQ62205 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn9aQ62205 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn9aQ62205 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn9aQ62205 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Gm27618-201ENSMUST00000183671 60 ntBASIC18.51■□□□□ 0.55
Scn9aQ62205 Gm27306-201ENSMUST00000183970 107 ntBASIC18.51■□□□□ 0.55
Scn9aQ62205 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.51■□□□□ 0.55
Scn9aQ62205 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn9aQ62205 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Scn9aQ62205 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn9aQ62205 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Gm5779-201ENSMUST00000218467 910 ntBASIC18.5■□□□□ 0.55
Scn9aQ62205 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.5■□□□□ 0.55
Scn9aQ62205 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.5■□□□□ 0.55
Scn9aQ62205 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.5■□□□□ 0.55
Scn9aQ62205 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Scn9aQ62205 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn9aQ62205 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.49■□□□□ 0.55
Scn9aQ62205 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn9aQ62205 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn9aQ62205 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.49■□□□□ 0.55
Scn9aQ62205 Gm24158-201ENSMUST00000175263 71 ntBASIC18.49■□□□□ 0.55
Scn9aQ62205 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.49■□□□□ 0.55
Scn9aQ62205 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn9aQ62205 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn9aQ62205 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Scn9aQ62205 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn9aQ62205 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn9aQ62205 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Gm13823-201ENSMUST00000119930 345 ntBASIC18.48■□□□□ 0.55
Scn9aQ62205 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.48■□□□□ 0.55
Scn9aQ62205 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.48■□□□□ 0.55
Scn9aQ62205 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn9aQ62205 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms