Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.3□□□□□ -0.28
SspnQ62147 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SspnQ62147 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.3□□□□□ -0.28
SspnQ62147 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SspnQ62147 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SspnQ62147 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.29□□□□□ -0.28
SspnQ62147 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.29□□□□□ -0.28
SspnQ62147 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.29□□□□□ -0.28
SspnQ62147 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.29□□□□□ -0.28
SspnQ62147 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SspnQ62147 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SspnQ62147 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SspnQ62147 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SspnQ62147 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.28□□□□□ -0.28
SspnQ62147 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.28□□□□□ -0.28
SspnQ62147 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.28□□□□□ -0.28
SspnQ62147 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SspnQ62147 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.28□□□□□ -0.28
SspnQ62147 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SspnQ62147 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
SspnQ62147 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SspnQ62147 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SspnQ62147 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
SspnQ62147 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.27□□□□□ -0.28
SspnQ62147 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SspnQ62147 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms