Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.49■□□□□ 0.39
Ecm1Q61508 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ecm1Q61508 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ecm1Q61508 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.48■□□□□ 0.39
Ecm1Q61508 Gm13365-201ENSMUST00000121188 973 ntBASIC17.48■□□□□ 0.39
Ecm1Q61508 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.48■□□□□ 0.39
Ecm1Q61508 Thap2-203ENSMUST00000218989 527 ntBASIC17.48■□□□□ 0.39
Ecm1Q61508 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ecm1Q61508 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ecm1Q61508 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Gm13616-201ENSMUST00000120600 222 ntBASIC17.47■□□□□ 0.39
Ecm1Q61508 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.47■□□□□ 0.39
Ecm1Q61508 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ecm1Q61508 Mir6956-201ENSMUST00000183598 62 ntBASIC17.47■□□□□ 0.39
Ecm1Q61508 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.47■□□□□ 0.39
Ecm1Q61508 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ecm1Q61508 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ecm1Q61508 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm14057-201ENSMUST00000120631 482 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm44335-201ENSMUST00000196879 141 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm44297-201ENSMUST00000198304 141 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm44346-201ENSMUST00000198851 141 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 Gm5312-201ENSMUST00000203728 547 ntBASIC17.46■□□□□ 0.39
Ecm1Q61508 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ecm1Q61508 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ecm1Q61508 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ecm1Q61508 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ecm1Q61508 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ecm1Q61508 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ecm1Q61508 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ecm1Q61508 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ecm1Q61508 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Ecm1Q61508 Gm11745-201ENSMUST00000121669 448 ntBASIC17.45■□□□□ 0.38
Ecm1Q61508 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms