Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Col11a1Q61245 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Gm13216-201ENSMUST00000117145 591 ntBASIC17.62■□□□□ 0.41
Col11a1Q61245 Gm13015-201ENSMUST00000118674 204 ntBASIC17.62■□□□□ 0.41
Col11a1Q61245 Gm14719-201ENSMUST00000121891 340 ntBASIC17.62■□□□□ 0.41
Col11a1Q61245 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.62■□□□□ 0.41
Col11a1Q61245 Mir8102-201ENSMUST00000184148 139 ntBASIC17.62■□□□□ 0.41
Col11a1Q61245 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col11a1Q61245 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col11a1Q61245 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Col11a1Q61245 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.61■□□□□ 0.41
Col11a1Q61245 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.61■□□□□ 0.41
Col11a1Q61245 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.61■□□□□ 0.41
Col11a1Q61245 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Col11a1Q61245 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col11a1Q61245 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col11a1Q61245 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.6■□□□□ 0.41
Col11a1Q61245 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Haglr-201ENSMUST00000100000 2085 ntBASIC17.6■□□□□ 0.41
Col11a1Q61245 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Gm7488-201ENSMUST00000117148 684 ntBASIC17.6■□□□□ 0.41
Col11a1Q61245 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Col11a1Q61245 Gm28630-201ENSMUST00000187806 498 ntBASIC17.6■□□□□ 0.41
Col11a1Q61245 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col11a1Q61245 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Gm27680-201ENSMUST00000184192 160 ntBASIC17.59■□□□□ 0.41
Col11a1Q61245 Gm44855-201ENSMUST00000205725 362 ntBASIC17.59■□□□□ 0.41
Col11a1Q61245 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
Col11a1Q61245 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col11a1Q61245 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col11a1Q61245 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col11a1Q61245 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.58■□□□□ 0.41
Col11a1Q61245 Gm13453-201ENSMUST00000118708 357 ntBASIC17.58■□□□□ 0.41
Col11a1Q61245 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.58■□□□□ 0.41
Col11a1Q61245 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Col11a1Q61245 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col11a1Q61245 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col11a1Q61245 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col11a1Q61245 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col11a1Q61245 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col11a1Q61245 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Col11a1Q61245 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.58■□□□□ 0.4
Col11a1Q61245 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.58■□□□□ 0.4
Col11a1Q61245 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col11a1Q61245 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.58■□□□□ 0.4
Col11a1Q61245 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms