Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Gm27275-201ENSMUST00000184318 272 ntBASIC13.61□□□□□ -0.23
Clns1aQ61189 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clns1aQ61189 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clns1aQ61189 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Gm37179-201ENSMUST00000194862 823 ntBASIC13.6□□□□□ -0.23
Clns1aQ61189 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Clns1aQ61189 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clns1aQ61189 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.59□□□□□ -0.23
Clns1aQ61189 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.59□□□□□ -0.23
Clns1aQ61189 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Gm15039-201ENSMUST00000118914 875 ntBASIC13.59□□□□□ -0.23
Clns1aQ61189 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.59□□□□□ -0.23
Clns1aQ61189 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Clns1aQ61189 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clns1aQ61189 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clns1aQ61189 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clns1aQ61189 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clns1aQ61189 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Clns1aQ61189 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clns1aQ61189 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Clns1aQ61189 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Clns1aQ61189 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.58□□□□□ -0.24
Clns1aQ61189 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms