Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scarb1Q61009 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.4□□□□□ -0.26
Scarb1Q61009 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scarb1Q61009 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.4□□□□□ -0.26
Scarb1Q61009 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scarb1Q61009 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scarb1Q61009 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scarb1Q61009 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scarb1Q61009 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.39□□□□□ -0.27
Scarb1Q61009 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.39□□□□□ -0.27
Scarb1Q61009 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.39□□□□□ -0.27
Scarb1Q61009 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.39□□□□□ -0.27
Scarb1Q61009 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scarb1Q61009 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scarb1Q61009 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scarb1Q61009 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.38□□□□□ -0.27
Scarb1Q61009 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.38□□□□□ -0.27
Scarb1Q61009 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scarb1Q61009 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scarb1Q61009 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.37□□□□□ -0.27
Scarb1Q61009 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scarb1Q61009 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scarb1Q61009 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms