Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 AC153937.1-201ENSMUST00000218734 412 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scaf1Q5U4C3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scaf1Q5U4C3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Nrn1-204ENSMUST00000224323 1779 ntBASIC20.57■□□□□ 0.88
Scaf1Q5U4C3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scaf1Q5U4C3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scaf1Q5U4C3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Rpph1-201ENSMUST00000175096 319 ntBASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scaf1Q5U4C3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms