Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Gm27045-201ENSMUST00000182145 1402 ntBASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav3-1Q5R1I8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav3-1Q5R1I8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Gm16464-201ENSMUST00000117815 1095 ntBASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-1Q5R1I8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms