Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-4Q5R1H9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Actl10-202ENSMUST00000226583 1501 ntBASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm12382-201ENSMUST00000122005 922 ntBASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm18025-201ENSMUST00000221733 862 ntBASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-4Q5R1H9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gm42545-201ENSMUST00000202755 922 ntBASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gm9731-201ENSMUST00000209480 747 ntBASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-4Q5R1H9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7d-4Q5R1H9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms