Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gm15565-201ENSMUST00000118890 427 ntBASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gm6257-201ENSMUST00000163864 910 ntBASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gm18032-201ENSMUST00000222541 538 ntBASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-3Q5R1E6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-3Q5R1E6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-3Q5R1E6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Mir770-201ENSMUST00000103252 94 ntBASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-3Q5R1E6 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms