Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trdv2-2Q5R1A4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Phf7-203ENSMUST00000226565 1971 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trdv2-2Q5R1A4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trdv2-2Q5R1A4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv2-2Q5R1A4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv2-2Q5R1A4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv2-2Q5R1A4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trdv2-2Q5R1A4 App-207ENSMUST00000227737 2827 ntBASIC12.15□□□□□ -0.47
Trdv2-2Q5R1A4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv2-2Q5R1A4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv2-2Q5R1A4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trdv2-2Q5R1A4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv2-2Q5R1A4 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.14□□□□□ -0.47
Trdv2-2Q5R1A4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms