Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf43Q5NCP0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Gm27300-201ENSMUST00000184085 97 ntBASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Gm27335-201ENSMUST00000184758 97 ntBASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf43Q5NCP0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rnf43Q5NCP0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf43Q5NCP0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rnf43Q5NCP0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rnf43Q5NCP0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf43Q5NCP0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Gm8344-201ENSMUST00000119813 856 ntBASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Gm11025-201ENSMUST00000140773 466 ntBASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Gm45167-201ENSMUST00000208007 322 ntBASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf43Q5NCP0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Gm4899-201ENSMUST00000178708 719 ntBASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms