Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Herc2Q4U2R1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm15483-201ENSMUST00000120338 456 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm18753-201ENSMUST00000201000 566 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm13350-201ENSMUST00000120519 479 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 AC122024.2-201ENSMUST00000220086 871 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Gm4857-201ENSMUST00000192718 785 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Herc2Q4U2R1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm5898-201ENSMUST00000121016 2071 ntBASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm15808-201ENSMUST00000119046 604 ntBASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Gm7669-201ENSMUST00000210184 1603 ntBASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Herc2Q4U2R1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Mir5132-201ENSMUST00000175166 71 ntBASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms