Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tmem40Q4FJU9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tmem40Q4FJU9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Gm43930-201ENSMUST00000203868 845 ntBASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Gm45925-201ENSMUST00000218882 744 ntBASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tmem40Q4FJU9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms