Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Gm8097-201ENSMUST00000117903 829 ntBASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ckap2Q3V1H1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 App-207ENSMUST00000227737 2827 ntBASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ckap2Q3V1H1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.15■□□□□ 0.5
Ckap2Q3V1H1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Ckap2Q3V1H1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Ckap2Q3V1H1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Prob1-201ENSMUST00000097619 3021 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm24589-201ENSMUST00000116692 94 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44357-201ENSMUST00000195897 142 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm19658-201ENSMUST00000196231 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44367-201ENSMUST00000196836 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44350-201ENSMUST00000197197 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44390-201ENSMUST00000197533 144 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44313-201ENSMUST00000198018 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44486-201ENSMUST00000198508 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44314-201ENSMUST00000199263 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44394-201ENSMUST00000199558 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44484-201ENSMUST00000199873 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44466-201ENSMUST00000200264 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Gm44359-201ENSMUST00000200671 138 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ckap2Q3V1H1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms