Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Gm5682-201ENSMUST00000173402 505 ntBASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Grk6-207ENSMUST00000225925 2769 ntBASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.36■□□□□ 0.05
Rnf223Q3UV31 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gm27628-201ENSMUST00000184911 107 ntBASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf223Q3UV31 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.34■□□□□ 0.05
Rnf223Q3UV31 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.34■□□□□ 0.05
Rnf223Q3UV31 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf223Q3UV31 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf223Q3UV31 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf223Q3UV31 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf223Q3UV31 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Gm15358-201ENSMUST00000119249 520 ntBASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Psmb5-202ENSMUST00000227257 622 ntBASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf223Q3UV31 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf223Q3UV31 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf223Q3UV31 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf223Q3UV31 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf223Q3UV31 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf223Q3UV31 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms