Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cks1brtQ3UNC9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cks1brtQ3UNC9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Mir2861-201ENSMUST00000175539 82 ntBASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Rps24-207ENSMUST00000224568 714 ntBASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cks1brtQ3UNC9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms