Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Ush2AQ2QI47 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm5898-201ENSMUST00000121016 2071 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm5187-201ENSMUST00000117317 991 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm18737-201ENSMUST00000173594 937 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm6244-201ENSMUST00000178732 841 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm37259-201ENSMUST00000193903 849 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm19164-201ENSMUST00000210667 640 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm29787-201ENSMUST00000222129 849 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm5320-201ENSMUST00000207163 1519 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm24514-201ENSMUST00000174961 285 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm43289-201ENSMUST00000200537 1475 ntBASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Ush2AQ2QI47 Gm13461-201ENSMUST00000120980 662 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm27731-201ENSMUST00000185192 107 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 AC122024.2-201ENSMUST00000220086 871 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Snord83b-201ENSMUST00000104546 94 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm18049-201ENSMUST00000208909 581 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Mir6392-201ENSMUST00000184924 108 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 AC154276.1-201ENSMUST00000228874 1299 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm5566-201ENSMUST00000116118 459 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm15483-201ENSMUST00000120338 456 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm43138-201ENSMUST00000199123 708 ntBASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ush2AQ2QI47 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gm44608-201ENSMUST00000206827 855 ntBASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ush2AQ2QI47 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms