Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm8344-201ENSMUST00000119813 856 ntBASIC11.6□□□□□ -0.55
Hspg2Q05793 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.6□□□□□ -0.55
Hspg2Q05793 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hspg2Q05793 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.59□□□□□ -0.55
Hspg2Q05793 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gm43125-201ENSMUST00000201724 730 ntBASIC11.59□□□□□ -0.55
Hspg2Q05793 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.59□□□□□ -0.55
Hspg2Q05793 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hspg2Q05793 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hspg2Q05793 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hspg2Q05793 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Hspg2Q05793 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hspg2Q05793 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm12151-201ENSMUST00000121374 290 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.58□□□□□ -0.56
Hspg2Q05793 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.58□□□□□ -0.56
Hspg2Q05793 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hspg2Q05793 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.57□□□□□ -0.56
Hspg2Q05793 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Gm36967-201ENSMUST00000193814 266 ntBASIC11.57□□□□□ -0.56
Hspg2Q05793 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hspg2Q05793 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hspg2Q05793 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hspg2Q05793 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hspg2Q05793 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hspg2Q05793 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hspg2Q05793 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hspg2Q05793 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.56□□□□□ -0.56
Hspg2Q05793 Gm12138-201ENSMUST00000122180 951 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms