Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.32■□□□□ 0.2
Sox9Q04887 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox9Q04887 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox9Q04887 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Sox9Q04887 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox9Q04887 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox9Q04887 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox9Q04887 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sox9Q04887 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sox9Q04887 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.31■□□□□ 0.2
Sox9Q04887 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox9Q04887 Gm20553-201ENSMUST00000204205 844 ntBASIC16.31■□□□□ 0.2
Sox9Q04887 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox9Q04887 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.31■□□□□ 0.2
Sox9Q04887 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.31■□□□□ 0.2
Sox9Q04887 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox9Q04887 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox9Q04887 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Sox9Q04887 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22065-201ENSMUST00000103753 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22066-201ENSMUST00000103761 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24932-201ENSMUST00000103763 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24115-201ENSMUST00000103799 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22190-201ENSMUST00000103827 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22191-201ENSMUST00000103831 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24721-201ENSMUST00000103849 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm28018-201ENSMUST00000103869 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm26399-201ENSMUST00000103937 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24158-201ENSMUST00000175263 71 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25349-201ENSMUST00000177728 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm23616-201ENSMUST00000177797 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25871-201ENSMUST00000177816 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24752-201ENSMUST00000178240 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24496-201ENSMUST00000178287 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25649-201ENSMUST00000178476 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25548-201ENSMUST00000178681 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm23147-201ENSMUST00000178841 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm26095-201ENSMUST00000179270 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22171-201ENSMUST00000179283 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm23936-201ENSMUST00000179354 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm22619-201ENSMUST00000179516 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25255-201ENSMUST00000179579 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24755-201ENSMUST00000179691 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm26506-201ENSMUST00000179692 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm25086-201ENSMUST00000179931 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm23243-201ENSMUST00000180047 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24659-201ENSMUST00000180212 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm24169-201ENSMUST00000180244 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm23689-201ENSMUST00000180354 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm27359-201ENSMUST00000184153 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm27785-201ENSMUST00000184268 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm27466-201ENSMUST00000184396 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Gm27703-201ENSMUST00000184836 110 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Thap2-203ENSMUST00000218989 527 ntBASIC16.3■□□□□ 0.2
Sox9Q04887 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox9Q04887 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox9Q04887 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox9Q04887 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox9Q04887 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox9Q04887 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms