Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.63□□□□□ -0.23
Smn1P97801 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smn1P97801 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Smn1P97801 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.63□□□□□ -0.23
Smn1P97801 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.63□□□□□ -0.23
Smn1P97801 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smn1P97801 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.62□□□□□ -0.23
Smn1P97801 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smn1P97801 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smn1P97801 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.62□□□□□ -0.23
Smn1P97801 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Gm20760-201ENSMUST00000179197 648 ntBASIC13.62□□□□□ -0.23
Smn1P97801 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.62□□□□□ -0.23
Smn1P97801 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smn1P97801 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smn1P97801 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smn1P97801 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Smn1P97801 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smn1P97801 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smn1P97801 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.61□□□□□ -0.23
Smn1P97801 Gm11336-201ENSMUST00000118168 334 ntBASIC13.61□□□□□ -0.23
Smn1P97801 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.61□□□□□ -0.23
Smn1P97801 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.61□□□□□ -0.23
Smn1P97801 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smn1P97801 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.61□□□□□ -0.23
Smn1P97801 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smn1P97801 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smn1P97801 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smn1P97801 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smn1P97801 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Smn1P97801 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smn1P97801 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.6□□□□□ -0.23
Smn1P97801 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smn1P97801 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smn1P97801 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms