Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Gm8655-201ENSMUST00000221159 852 ntBASIC13.09□□□□□ -0.31
Gfra1P97785 Gm6296-201ENSMUST00000222599 943 ntBASIC13.09□□□□□ -0.31
Gfra1P97785 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.09□□□□□ -0.31
Gfra1P97785 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.09□□□□□ -0.31
Gfra1P97785 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gfra1P97785 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gfra1P97785 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.09□□□□□ -0.31
Gfra1P97785 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gfra1P97785 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.08□□□□□ -0.31
Gfra1P97785 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gfra1P97785 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gfra1P97785 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gfra1P97785 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.08□□□□□ -0.31
Gfra1P97785 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gfra1P97785 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Gfra1P97785 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Gfra1P97785 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm4459-201ENSMUST00000118750 468 ntBASIC13.08□□□□□ -0.32
Gfra1P97785 Gm7862-201ENSMUST00000121461 292 ntBASIC13.08□□□□□ -0.32
Gfra1P97785 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm4535-201ENSMUST00000182274 558 ntBASIC13.08□□□□□ -0.32
Gfra1P97785 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.08□□□□□ -0.32
Gfra1P97785 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.08□□□□□ -0.32
Gfra1P97785 Gm10355-201ENSMUST00000097146 517 ntBASIC13.08□□□□□ -0.32
Gfra1P97785 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gfra1P97785 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.08□□□□□ -0.32
Gfra1P97785 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gfra1P97785 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Gfra1P97785 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44357-201ENSMUST00000195897 142 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm19658-201ENSMUST00000196231 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44367-201ENSMUST00000196836 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44350-201ENSMUST00000197197 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44390-201ENSMUST00000197533 144 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44313-201ENSMUST00000198018 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44486-201ENSMUST00000198508 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44314-201ENSMUST00000199263 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44394-201ENSMUST00000199558 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44484-201ENSMUST00000199873 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44466-201ENSMUST00000200264 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Gm44359-201ENSMUST00000200671 138 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.07□□□□□ -0.32
Gfra1P97785 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gfra1P97785 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gfra1P97785 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms