Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.59□□□□□ -0.07
Cacna1aP97445 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cacna1aP97445 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Cacna1aP97445 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.59□□□□□ -0.07
Cacna1aP97445 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1aP97445 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Cacna1aP97445 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.59□□□□□ -0.07
Cacna1aP97445 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.59□□□□□ -0.07
Cacna1aP97445 Gm18622-201ENSMUST00000219361 595 ntBASIC14.59□□□□□ -0.07
Cacna1aP97445 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.59□□□□□ -0.07
Cacna1aP97445 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1aP97445 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1aP97445 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1aP97445 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1aP97445 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Gm45612-201ENSMUST00000211320 160 ntBASIC14.58□□□□□ -0.08
Cacna1aP97445 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.58□□□□□ -0.08
Cacna1aP97445 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cacna1aP97445 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacna1aP97445 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.58□□□□□ -0.08
Cacna1aP97445 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.58□□□□□ -0.08
Cacna1aP97445 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1aP97445 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.57□□□□□ -0.08
Cacna1aP97445 Gm45167-201ENSMUST00000208007 322 ntBASIC14.57□□□□□ -0.08
Cacna1aP97445 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacna1aP97445 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1aP97445 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Gm7653-201ENSMUST00000214567 508 ntBASIC14.56□□□□□ -0.08
Cacna1aP97445 Gm25857-201ENSMUST00000082788 129 ntBASIC14.56□□□□□ -0.08
Cacna1aP97445 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.56□□□□□ -0.08
Cacna1aP97445 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacna1aP97445 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1aP97445 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms