Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Lig3P97386 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lig3P97386 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lig3P97386 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Lig3P97386 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.26■□□□□ 0.35
Lig3P97386 Rprl3-201ENSMUST00000157400 290 ntBASIC17.26■□□□□ 0.35
Lig3P97386 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
Lig3P97386 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lig3P97386 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Lig3P97386 Gm15467-201ENSMUST00000120582 445 ntBASIC17.25■□□□□ 0.35
Lig3P97386 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44357-201ENSMUST00000195897 142 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm19658-201ENSMUST00000196231 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44367-201ENSMUST00000196836 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44350-201ENSMUST00000197197 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44390-201ENSMUST00000197533 144 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44313-201ENSMUST00000198018 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44486-201ENSMUST00000198508 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44454-201ENSMUST00000198541 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44314-201ENSMUST00000199263 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44394-201ENSMUST00000199558 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44484-201ENSMUST00000199873 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44466-201ENSMUST00000200264 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gm44359-201ENSMUST00000200671 138 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.25■□□□□ 0.35
Lig3P97386 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.25■□□□□ 0.35
Lig3P97386 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lig3P97386 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lig3P97386 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.24■□□□□ 0.35
Lig3P97386 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lig3P97386 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Lig3P97386 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Lig3P97386 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.24■□□□□ 0.35
Lig3P97386 Gm2756-201ENSMUST00000195851 400 ntBASIC17.24■□□□□ 0.35
Lig3P97386 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.24■□□□□ 0.35
Lig3P97386 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lig3P97386 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.24■□□□□ 0.35
Lig3P97386 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lig3P97386 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lig3P97386 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms