Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim43cP86449 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim43cP86449 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43cP86449 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim43cP86449 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim43cP86449 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.22■□□□□ 0.35
Trim43cP86449 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim43cP86449 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trim43cP86449 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Gm7506-201ENSMUST00000207758 815 ntBASIC17.22■□□□□ 0.35
Trim43cP86449 Gm9172-201ENSMUST00000212092 954 ntBASIC17.22■□□□□ 0.35
Trim43cP86449 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Trim43cP86449 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Trim43cP86449 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43cP86449 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim43cP86449 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim43cP86449 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Trim43cP86449 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim43cP86449 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim43cP86449 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim43cP86449 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43cP86449 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.21■□□□□ 0.35
Trim43cP86449 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Trim43cP86449 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim43cP86449 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43cP86449 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43cP86449 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Trim43cP86449 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Trim43cP86449 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43cP86449 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
Trim43cP86449 Prob1-201ENSMUST00000097619 3021 ntBASIC17.21■□□□□ 0.34
Trim43cP86449 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
Trim43cP86449 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim43cP86449 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Gm34391-201ENSMUST00000203706 907 ntBASIC17.2■□□□□ 0.34
Trim43cP86449 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim43cP86449 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim43cP86449 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim43cP86449 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43cP86449 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim43cP86449 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim43cP86449 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm8825-201ENSMUST00000182565 998 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm4518-201ENSMUST00000182638 718 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms