Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.34■□□□□ 0.21
Trim43bP86448 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim43bP86448 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43bP86448 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim43bP86448 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43bP86448 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43bP86448 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43bP86448 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43bP86448 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43bP86448 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Trim43bP86448 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43bP86448 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim43bP86448 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43bP86448 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43bP86448 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.32■□□□□ 0.2
Trim43bP86448 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43bP86448 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43bP86448 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim43bP86448 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43bP86448 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.32■□□□□ 0.2
Trim43bP86448 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim43bP86448 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.31■□□□□ 0.2
Trim43bP86448 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43bP86448 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim43bP86448 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trim43bP86448 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43bP86448 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43bP86448 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43bP86448 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43bP86448 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim43bP86448 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim43bP86448 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim43bP86448 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Gm29518-201ENSMUST00000190858 372 ntBASIC16.3■□□□□ 0.2
Trim43bP86448 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim43bP86448 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim43bP86448 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms