Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.12□□□□□ -0.15
H3f3aP84244 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
H3f3aP84244 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
H3f3aP84244 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H3f3aP84244 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
H3f3aP84244 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.11□□□□□ -0.15
H3f3aP84244 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.11□□□□□ -0.15
H3f3aP84244 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
H3f3aP84244 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.11□□□□□ -0.15
H3f3aP84244 Gm25745-201ENSMUST00000174945 133 ntBASIC14.11□□□□□ -0.15
H3f3aP84244 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
H3f3aP84244 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.11□□□□□ -0.15
H3f3aP84244 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.11□□□□□ -0.15
H3f3aP84244 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.11□□□□□ -0.15
H3f3aP84244 Birc2-201ENSMUST00000054878 378 ntBASIC14.11□□□□□ -0.15
H3f3aP84244 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.11□□□□□ -0.15
H3f3aP84244 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H3f3aP84244 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
H3f3aP84244 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.1□□□□□ -0.15
H3f3aP84244 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.1□□□□□ -0.15
H3f3aP84244 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
H3f3aP84244 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Gm6257-201ENSMUST00000163864 910 ntBASIC14.1□□□□□ -0.15
H3f3aP84244 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Gm34391-201ENSMUST00000203706 907 ntBASIC14.1□□□□□ -0.15
H3f3aP84244 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H3f3aP84244 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H3f3aP84244 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
H3f3aP84244 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.09□□□□□ -0.15
H3f3aP84244 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.09□□□□□ -0.15
H3f3aP84244 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
H3f3aP84244 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Gm12644-201ENSMUST00000119935 606 ntBASIC14.09□□□□□ -0.15
H3f3aP84244 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.09□□□□□ -0.15
H3f3aP84244 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.09□□□□□ -0.15
H3f3aP84244 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.09□□□□□ -0.15
H3f3aP84244 Gm17971-201ENSMUST00000190239 806 ntBASIC14.09□□□□□ -0.15
H3f3aP84244 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.09□□□□□ -0.15
H3f3aP84244 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
H3f3aP84244 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms