Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CiitaP79621 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.15■□□□□ 0.34
CiitaP79621 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.15■□□□□ 0.34
CiitaP79621 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.15■□□□□ 0.34
CiitaP79621 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.15■□□□□ 0.34
CiitaP79621 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CiitaP79621 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CiitaP79621 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CiitaP79621 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CiitaP79621 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CiitaP79621 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Gm11764-201ENSMUST00000120221 623 ntBASIC17.14■□□□□ 0.33
CiitaP79621 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.14■□□□□ 0.33
CiitaP79621 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.14■□□□□ 0.33
CiitaP79621 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CiitaP79621 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.14■□□□□ 0.33
CiitaP79621 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.14■□□□□ 0.33
CiitaP79621 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.14■□□□□ 0.33
CiitaP79621 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CiitaP79621 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CiitaP79621 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CiitaP79621 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.13■□□□□ 0.33
CiitaP79621 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.13■□□□□ 0.33
CiitaP79621 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Gm27628-201ENSMUST00000184911 107 ntBASIC17.13■□□□□ 0.33
CiitaP79621 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CiitaP79621 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiitaP79621 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.12■□□□□ 0.33
CiitaP79621 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.12■□□□□ 0.33
CiitaP79621 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CiitaP79621 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.12■□□□□ 0.33
CiitaP79621 Gm19164-201ENSMUST00000210667 640 ntBASIC17.12■□□□□ 0.33
CiitaP79621 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.12■□□□□ 0.33
CiitaP79621 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.12■□□□□ 0.33
CiitaP79621 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.12■□□□□ 0.33
CiitaP79621 Psmb5-202ENSMUST00000227257 622 ntBASIC17.12■□□□□ 0.33
CiitaP79621 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiitaP79621 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CiitaP79621 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CiitaP79621 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CiitaP79621 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CiitaP79621 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms