Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lhx1P63006 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Gm19164-201ENSMUST00000210667 640 ntBASIC15.54■□□□□ 0.08
Lhx1P63006 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.54■□□□□ 0.08
Lhx1P63006 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lhx1P63006 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx1P63006 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.54■□□□□ 0.08
Lhx1P63006 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lhx1P63006 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lhx1P63006 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lhx1P63006 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.53■□□□□ 0.08
Lhx1P63006 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Lhx1P63006 Gm6550-201ENSMUST00000187574 993 ntBASIC15.53■□□□□ 0.08
Lhx1P63006 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Lhx1P63006 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.53■□□□□ 0.08
Lhx1P63006 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lhx1P63006 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.53■□□□□ 0.08
Lhx1P63006 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lhx1P63006 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Lhx1P63006 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Lhx1P63006 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.52■□□□□ 0.08
Lhx1P63006 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.52■□□□□ 0.08
Lhx1P63006 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Lhx1P63006 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.52■□□□□ 0.08
Lhx1P63006 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.52■□□□□ 0.08
Lhx1P63006 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.52■□□□□ 0.08
Lhx1P63006 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.52■□□□□ 0.08
Lhx1P63006 Gm6443-201ENSMUST00000203599 874 ntBASIC15.52■□□□□ 0.08
Lhx1P63006 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.52■□□□□ 0.08
Lhx1P63006 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.52■□□□□ 0.08
Lhx1P63006 AV026068-213ENSMUST00000223675 1171 ntBASIC15.52■□□□□ 0.08
Lhx1P63006 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lhx1P63006 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.52■□□□□ 0.07
Lhx1P63006 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.52■□□□□ 0.07
Lhx1P63006 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lhx1P63006 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lhx1P63006 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lhx1P63006 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms