Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.35□□□□□ -0.43
Pfn1P62962 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Pfn1P62962 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pfn1P62962 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfn1P62962 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.34□□□□□ -0.43
Pfn1P62962 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.34□□□□□ -0.43
Pfn1P62962 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.34□□□□□ -0.43
Pfn1P62962 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.34□□□□□ -0.43
Pfn1P62962 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Pfn1P62962 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pfn1P62962 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfn1P62962 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pfn1P62962 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pfn1P62962 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pfn1P62962 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Pfn1P62962 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pfn1P62962 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Gm27275-201ENSMUST00000184318 272 ntBASIC12.33□□□□□ -0.44
Pfn1P62962 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.33□□□□□ -0.44
Pfn1P62962 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pfn1P62962 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pfn1P62962 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pfn1P62962 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pfn1P62962 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfn1P62962 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.32□□□□□ -0.44
Pfn1P62962 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.32□□□□□ -0.44
Pfn1P62962 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pfn1P62962 Gm15039-201ENSMUST00000118914 875 ntBASIC12.32□□□□□ -0.44
Pfn1P62962 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms