Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.35□□□□□ -0.59
Rpl39P62892 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rpl39P62892 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rpl39P62892 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rpl39P62892 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.34□□□□□ -0.59
Rpl39P62892 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Gm13186-201ENSMUST00000118031 316 ntBASIC11.34□□□□□ -0.59
Rpl39P62892 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.34□□□□□ -0.59
Rpl39P62892 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.34□□□□□ -0.59
Rpl39P62892 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rpl39P62892 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.34□□□□□ -0.59
Rpl39P62892 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Rpl39P62892 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rpl39P62892 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rpl39P62892 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rpl39P62892 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Rpl39P62892 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Gm15378-201ENSMUST00000121894 207 ntBASIC11.33□□□□□ -0.6
Rpl39P62892 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.33□□□□□ -0.6
Rpl39P62892 Trmt13-210ENSMUST00000198454 880 ntBASIC11.33□□□□□ -0.6
Rpl39P62892 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rpl39P62892 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Rpl39P62892 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.33□□□□□ -0.6
Rpl39P62892 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.33□□□□□ -0.6
Rpl39P62892 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.33□□□□□ -0.6
Rpl39P62892 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpl39P62892 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.32□□□□□ -0.6
Rpl39P62892 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.32□□□□□ -0.6
Rpl39P62892 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.32□□□□□ -0.6
Rpl39P62892 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms