Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lmo4P61969 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmo4P61969 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Lmo4P61969 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.78□□□□□ -0.36
Lmo4P61969 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.78□□□□□ -0.36
Lmo4P61969 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.78□□□□□ -0.36
Lmo4P61969 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lmo4P61969 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.78□□□□□ -0.36
Lmo4P61969 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.78□□□□□ -0.36
Lmo4P61969 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.78□□□□□ -0.36
Lmo4P61969 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.78□□□□□ -0.36
Lmo4P61969 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.78□□□□□ -0.36
Lmo4P61969 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.78□□□□□ -0.36
Lmo4P61969 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.78□□□□□ -0.36
Lmo4P61969 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lmo4P61969 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lmo4P61969 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.77□□□□□ -0.36
Lmo4P61969 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Gm14822-201ENSMUST00000122247 291 ntBASIC12.77□□□□□ -0.37
Lmo4P61969 Gm25925-201ENSMUST00000158314 306 ntBASIC12.77□□□□□ -0.37
Lmo4P61969 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lmo4P61969 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lmo4P61969 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.77□□□□□ -0.37
Lmo4P61969 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.77□□□□□ -0.37
Lmo4P61969 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lmo4P61969 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lmo4P61969 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Lmo4P61969 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.76□□□□□ -0.37
Lmo4P61969 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.76□□□□□ -0.37
Lmo4P61969 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lmo4P61969 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms